Evaluation of WGS-subtyping methods for epidemiological surveillance of foodborne salmonellosis

Table 5 Distribution of plasmids among outbreak and non-outbreak strains of Salmonella Dublin

	pSA19992307 (NZ_CP030208)	pSE81–1705 (NZ_CP018654)	Plasmid: 4 (LN829404)	pATCC39184 (NZ_CP019180)	pSDU2-USMARC-69807 (NZ_CP032381)	Plasmid: 3 (NZ_LN868945)
Outbreak strains:
902,637	Present	Present	Present	Absent	Absent	Absent
MF036933	Present	Present	Present	Absent	Absent	Absent
MF036980	Present	Present	Present	Absent	Absent	Absent
517,138	Present	Present	Present	Absent	Absent	Absent
MF6869	Present	Present	Present	Absent	Absent	Absent
M26560	Present	Present	Present	Absent	Absent	Absent
MF7067	Present	Present	Present	Absent	Absent	Absent
MF7174	Present	Present	Present	Absent	Absent	Absent
40,986	Present	Present	Present	Absent	Absent	Absent
Non-outbreak strains:
MF038630	Present	Present	Present	Absent	Absent	Absent
M1314220	Absent	Present	Present	Present	Absent	Absent
M54827	Present	Present	Present	Absent	Absent	Absent
MB12371	Absent	Present	Present	Present	Absent	Absent
MF5994	Present	Present	Present	Absent	Absent	Absent
MB7978	Present	Present	Present	Absent	Absent	Absent
B289223	Present	Present	Present	Absent	Absent	Absent
11F310	Present	Present	Present	Absent	Absent	Absent
MB98550	Present	Present	Present	Absent	Absent	Absent
MF8409	Present	Present	Present	Absent	Absent	Absent
W151R0	Present	Present	Present	Absent	Absent	Absent
B261193	Absent	Present	Present	Absent	Present	Absent
MP015199F	Present	Present	Present	Absent	Absent	Absent
Food strains:						Absent
^a2014LSAL02972	Present	Present	Absent	Absent	Absent	Present
^a2015LSAL00258	Present	Present	Absent	Absent	Absent	Present

^aSalmonella Dublin strains isolated from raw milk cheeses related to other outbreaks occurred in France [10]

ISSN: 2524-4655