From: Evaluation of WGS-subtyping methods for epidemiological surveillance of foodborne salmonellosis
| Strain ID | pATCC14028 (NZ_CP034231) | Plasmid: 4 (LN829404) | pSE81–1705 (NZ_CP018654) | pSLT_VNP20009 (NZ_CP008745) |
|---|---|---|---|---|
| Food strains: | ||||
| aH133060375 | Present | Present | Present | Absent |
| aH133060376 | Present | Present | Present | Absent |
| aH133060377 | Present | Present | Present | Absent |
| aH133060378 | Present | Present | Present | Absent |
| Outbreak strains: | ||||
| H132300541 | Present | Present | Present | Absent |
| H132940743 | Present | Present | Present | Absent |
| H132940744 | Present | Present | Present | Absent |
| H132940745 | Present | Present | Present | Absent |
| H132940746 | Present | Present | Present | Absent |
| H132940748 | Present | Present | Present | Absent |
| H132940749 | Present | Present | Present | Absent |
| H132940750 | Present | Present | Present | Absent |
| H132940751 | Present | Present | Present | Absent |
| H132940753 | Present | Present | Present | Absent |
| H132940754 | Present | Present | Present | Absent |
| H132940756 | Present | Present | Present | Absent |
| H133000645 | Present | Present | Present | Absent |
| H133000654 | Present | Present | Present | Absent |
| H133300609 | Absent | Present | Present | Present |
| Non-outbreak strains: | ||||
| H121600325 | Present | Present | Present | Absent |
| H122020454 | Present | Present | Present | Absent |
| H122720573 | Present | Present | Present | Absent |
| H123020544 | Present | Present | Present | Absent |
| H123920661 | Present | Present | Present | Absent |
| H124860455 | Present | Present | Present | Absent |
| H132780266 | Present | Present | Present | Absent |
| H132920685 | Present | Present | Present | Absent |
| H132960590 | Present | Present | Present | Absent |
| H132980531 | Present | Present | Present | Absent |
| H133040470 | Present | Present | Present | Absent |
| H133260293 | Present | Present | Present | Absent |
| H133400611 | Present | Present | Present | Absent |